Projects

Faster Mean-shift: GPU-accelerated Embedding-clustering for Cell Segmentation and Tracking

Mengyang Zhao, Aadarsh Jha, Quan Liu, Bryan A. Millis, Anita Mahadevan-Jansen, Le Lu, Bennett A. Landman, Matthew J.Tyskac, **Yuankai Huo** ***Medical Image Analysis*** **(2021)**

Map3D: Registration Based Multi-Object Tracking on 3D Serial Whole Slide Images

Ruining Deng, Haichun Yang, Aadarsh Jha, Yuzhe Lu, Peng Chu, Agnes Fogo, **Yuankai Huo** ***IEEE Transactions on Medical Imaging*** **(2021)**

SimTriplet: Simple Triplet Representation Learning with a Single GPU

Quan Liu, Peter C. Louis, Yuzhe Lu, Aadarsh Jha, Mengyang Zhao, Ruining Deng, Tianyuan Yao, Joseph T. Roland, Haichun Yang, Shilin Zhao, Lee E. Wheless, **Yuankai Huo** ***MICCAI*** **(2021)**

Pancreas CT Segmentation by Predictive Phenotyping

Yucheng Tang, Riqiang Gao, Ho Hin Lee, Qi Yang, Xin Yu, Yuyin Zhou, Shunxing Bao, **Yuankai Huo**, Jeffrey Spraggins, Jack Virostko, Zhoubing Xu, Bennet A. Landman ***MICCAI*** **(2021)**

Lung Cancer Risk Estimation with Incomplete Data: A Joint Missing Imputation Perspective

Riqiang Gao, Yucheng Tang, Kaiwen Xu, Ho Hin Lee, Steve A. Deppen, Kim L. Sandler, Pierre P. Massion, Thomas A. Lasko, **Yuankai Huo**, Bennett A. Landman ***MICCAI*** **(2021)**

From Brain to Body: Learning Low-Frequency Respiration and Cardiac Signals from fMRI Dynamics

Roza Bayrak, Colin Hansen, Nafis Ahmed, Ilwoo Lyu, **Yuankai Huo**, Catie Chang ***MICCAI*** **(2021)**

AI Applications in Renal Pathology

**Yuankai Huo**, Ruining Deng, Quan Liu, Agnes B. Fogo, Haichun Yang ***Kidney International*** **(2021)**

ASIST: Annotation-free Synthetic Instance Segmentation and Tracking by Adversarial Simulations

Quan Liu, Isabella M. Gaeta, Mengyang Zhao, Ruining Deng; Aadarsh Jha, Bryan A. Millis, Anita Mahadevan-Jansen, Matthew J. Tyska, **Yuankai Huo** ***Computers in Biology and Medicine*** **(2021)**

BEDs: Bagging Ensemble Deep Segmentation for Nucleus Segmentation with Testing Stage Stain Augmentation

Xing Li, Haichun Yang, Jiaxin He, Aadarsh Jha, Agnes B. Fogo, Lee E. Wheless, Shilin Zhao, **Yuankai Huo** ***ISBI*** **(2021)**

Compound Figure Separation of Biomedical Images with Side Loss

Tianyuan Yao, Chang Qu, Quan Liu, Ruining Deng, Yuanhan Tian, Jiachen Xu, Aadarsh Jha, Shunxing Bao, Mengyang Zhao, Agnes B Fogo, Bennett A Landman, Catie Chang, Haichun Yang, **Yuankai Huo** ***DALI*** **(2021)**